Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015789035.1_cds_XP_016494036.1_801
CDS Infomation

[gene=LOC107813297] [db_xref=GeneID:107813297] [protein=rust resistance kinase Lr10-like] [protein_id=XP_016494036.1] [location=complement(join(4585..5696,5789..5815,6320..6995))] [gbkey=CDS]
Sequence

ATGGCCCTCTTTTTTCTCTTGCACTTACTTCTCATAATCATGGTATCCTTTGCTATGTTT
GGTGAAGGAGCAAATGATTGCAAAGAGTCTAGGTGCAATAGTGATGGCCCTAGCATTCGT
TTCCCCTTCAGGCTTCAACATCAGCCCCAACATTGTGGATATCCTGGCTTTGAGCTATCT
TGTACCAACAATAAGACCATACTCAGTACCCTTCCCAATTCACTTATACTAATAGTTGAG
GATATTGATTATGCGTCACAGGAGATTAGACTTTATTATCCGAGAAGTTGTATTGTGAAC
CTATTGCATTTTAACTTTTCAGCATCTCCTTTCCTCTTAAAGCACGAGCCTTTTCTTTGT
AACTTTTCCATTTTTAGTCCTTCTGGTATCTCAAACGGTGACTTTGGCTCACAGAATTGC
TCTGCCACCTCTGACTCTGGATTAATTGCTCTCAGCGATTCAGAGAATTTGGAAGACTAT
CCTACTCTTTTAGATTATAAAAAGATTGAGGAAATTTCATCTGTTCCCTGTGATCTAGGA
TACGATCAGCCCTTCTGGATGAGTTGGTTAAATCCAAAGTGTGGCAACTGTGGAGGTCTT
GGAATGGATTGTGGTTTCAAGAACTATAGCAACCAACTGCAGGGAACTCAATGTTTCGAC
AAACCGACTACAAAAGGCGGATTTAAGGAACCACTGATTGCAGGTGGAGTATTAGGATTT
CTTCTTTTGGGAATTATTATGTTGGCACTCTATGAGTTTTATAGCTCAAGCAAAATTGAA
AGAGAGAATCAAGCTAGAGTTGAGAAGTTTCTGGAAGACTACAGAGCTCTCAGGCCCACT
AGATATACTTATGCAGAGATTAAAAAGATAACAAATATGTTTCACCAACAATTGGGAGAG
GGAGCTTACGGGGTTGTTTATAAAGGAACACTTTCTAATGAAATTCATGTTGCTGTAAAA
GTTCTCAATGATTCCATAGGAAATGGGGAAGAATTTATTAATGAAGTTGCAGCAATGGGG
AAAATCCACCACTTCAATGTGGTTCGCCTCGTTGGCTATTGCGCTGATGGATTCAGAAAC
GCTCTTGTGTATGAATATTTGCCAAATCAGTCGCTTGACAAACTCATTTTTCCAGCAAGT
TCCAAAGATCACATTACCCTTAATTGGAAGAAGCTTCATGATATTGCTATGGGTATAGCT
AAAGGACTGGAGTATCTTCATCAAGGATGTGACCAACAAATCCTTCATTTTGATATCAAA
CCCCAAAATATTCTGTTAGACCATAACTTGAACCCAAAGATTGCTGATTTTGGTCTTGCA
AAGTTATGCTCTAAAGAGAAAAGTGGTGTAACCATGACTGAAGCTAGAGGAACCATGGGT
TATATTGCACCAGAAGTATTATCCAGCAATTTTGGAAAAGCGTCTCATAAATCTGATGTC
TATAGCTTTGGGATGCTGCTACTTGAAATGGTTGGAGGGAGGAAGAATTTTGACGCAAAG
GCCAATAATAGCCAAGTGAACTTTTCTGAGTGGATTCATCAACGAGTGAATGAAGGAGAA
GAGTTGAAAATCAGGATCGAGGAAGATGATGATATCATAATTGTAAGGAAATTAGCTATT
ATAGGAGTTTGGTGCATCCAATGGAATGCAACGGATCGACCTTCAATCAAAATTGTTACA
CAAATGCTAGAAGGAGATGGGAGCAATCTAACTATTCCTCCTCCCTTTACAGCAAGATAT
ACCAGCCACCTAGGAGCTGGAGTGATTGCATGCCCTTCTAGGGAAGAGTTGAGTGAAATA
TCAGAACAAGAATGA

Peptide Sequence

PEP ID

XP_016494036.1
PEP Infomation

PREDICTED: rust resistance kinase Lr10-like [Nicotiana tabacum]
Sequence

MALFFLLHLLLIIMVSFAMFGEGANDCKESRCNSDGPSIRFPFRLQHQPQHCGYPGFELS
CTNNKTILSTLPNSLILIVEDIDYASQEIRLYYPRSCIVNLLHFNFSASPFLLKHEPFLC
NFSIFSPSGISNGDFGSQNCSATSDSGLIALSDSENLEDYPTLLDYKKIEEISSVPCDLG
YDQPFWMSWLNPKCGNCGGLGMDCGFKNYSNQLQGTQCFDKPTTKGGFKEPLIAGGVLGF
LLLGIIMLALYEFYSSSKIERENQARVEKFLEDYRALRPTRYTYAEIKKITNMFHQQLGE
GAYGVVYKGTLSNEIHVAVKVLNDSIGNGEEFINEVAAMGKIHHFNVVRLVGYCADGFRN
ALVYEYLPNQSLDKLIFPASSKDHITLNWKKLHDIAMGIAKGLEYLHQGCDQQILHFDIK
PQNILLDHNLNPKIADFGLAKLCSKEKSGVTMTEARGTMGYIAPEVLSSNFGKASHKSDV
YSFGMLLLEMVGGRKNFDAKANNSQVNFSEWIHQRVNEGEELKIRIEEDDDIIIVRKLAI
IGVWCIQWNATDRPSIKIVTQMLEGDGSNLTIPPPFTARYTSHLGAGVIACPSREELSEI
SEQE

Transcript Sequence

Gene sequence data has not been registered.